Association of variation in the \(\it {LAMA3}\) gene, encoding the alpha-chain of laminin 5, with atopic dermatitis in a German case-control cohort

  • \(\bf Background:\) Atopic dermatitis (AD) is a chronic inflammatory skin disorder caused by complex interaction of genetic and environmental factors. Besides mutations in the filaggrin gene, leading to impaired skin barrier function, variation in genes encoding additional skin proteins has been suggested to contribute to disease risk. Laminin 5, playing an important role in skin integrity, is composed of three subunits encoded by the \(\it {LAMA3}\), \(\it {LAMB3}\) and \(\it {LAMC2}\) genes in which biallelic mutations cause epidermolysis bullosa junctionalis. We aimed at evaluating the role of variation in the \(\it {LAMA3}\), \(\it {LAMB3}\) and \(\it {LAMC2}\) genes for AD pathogenesis. \(\bf Methods:\) 29 single nucleotide polymorphisms (SNPs) were genotyped in the three genes in a German AD case-control cohort comprising 470 unrelated AD patients and 320 non-atopic controls by means of restriction enzyme digestion. Allele, genotype and haplotype frequencies were compared between cases and controls using chi-square testing and the Haploview software. \(\bf Results:\) Several SNPs in the \(\it {LAMA3}\) gene showed significant association with AD in our cohort (p<0.01),while we did not detect association with variations in the \(\it {LAMB3}\) and \(\it {LAMC2}\) genes. Haplotype analysis additionally revealed several significantly associated haplotypes in the \(\it {LAMA3}\) gene. Due to extensive linkage disequilibrium, though, we were not able to further differentiate the specific disease causing variation(s) in this region. \(\bf Conclusions:\) We established the \(\it {LAMA3}\) gene as novel potential susceptibility gene for AD. Additional studies in independent cohorts are needed to replicate these results.

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Metadaten
Author:Susanne StemmlerGND, Qumar ParwezGND, Elisabeth Petrasch-ParwezGND, Jörg T. EpplenORCiDGND, Sabine HoffjanGND
URN:urn:nbn:de:hbz:294-57462
DOI:https://doi.org/10.1186/1471-5945-14-17
Parent Title (English):BMC Dermatology
Document Type:Article
Language:English
Date of Publication (online):2018/06/25
Date of first Publication:2014/11/03
Publishing Institution:Ruhr-Universität Bochum, Universitätsbibliothek
Tag:Genetic factors; LAMA3; Laminin 5; Open Access Fonds; Skin barrier function
Atopic dermatitis
Volume:14
First Page:17-1
Last Page:17-6
Note:
Article Processing Charge funded by the Deutsche Forschungsgemeinschaft (DFG) and the Open Access Publication Fund of Ruhr-Universität Bochum.
Institutes/Facilities:Medizinische Fakultät, Abteilung für Humangenetik
Dewey Decimal Classification:Technik, Medizin, angewandte Wissenschaften / Medizin, Gesundheit
open_access (DINI-Set):open_access
faculties:Medizinische Fakultät
Licence (English):License LogoCreative Commons - CC BY 4.0 - Attribution 4.0 International